SRR057526 (PRJNA129385)

Processing Status: Completed

General Details

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Sample Name GSM546926
Organism Homo sapiens
Release Date 8/2010

Sample Links

Run Details

Spots 20366374
Total Bases 733189464
Total Bases 733189464

Repository Details

SRA SRR057526
ENA SRR057526
BioProject PRJNA129385

Experiment Details

Title Footprint_mock_12hr_run1

Sample Details

Run Accession SRR057526
Total Number Of Spots (Original File)) 20366374
Total Number Of Bases (Original File) 733189464
Average Read Length 36
Original File Size (Mb) 333
Experiment Id SRX021972
Library Name GSM546926: Footprint_mock_12hr_run1
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP002605
Pubmed Id 20703300
Sample SRS079391
Biosample SAMN00014836
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM546926
Center Name GEO
Submission SRA020150
Month 8
Year 2010
Author Guo
Sample Source HeLa
Sample Title Footprint_mock_12hr_run1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Inhibitor Cycloheximide
Timepoint 12h
Sex female
Strain C57BL/6
Genotype mir-223 knockout
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR057526 Homo sapiens HeLa Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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