SRR057529 (PRJNA129385)

Processing Status: Completed

General Details

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Sample Name GSM546928
Organism Homo sapiens
Release Date 8/2010

Sample Links

Run Details

Spots 20233514
Total Bases 728406504
Total Bases 728406504

Repository Details

SRA SRR057529
ENA SRR057529
BioProject PRJNA129385

Experiment Details

Title Footprint_miR-155_12hr_run1

Sample Details

Run Accession SRR057529
Total Number Of Spots (Original File)) 20233514
Total Number Of Bases (Original File) 728406504
Average Read Length 36
Original File Size (Mb) 338
Experiment Id SRX021974
Library Name GSM546928: Footprint_miR-155_12hr_run1
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP002605
Pubmed Id 20703300
Sample SRS079393
Biosample SAMN00014838
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM546928
Center Name GEO
Submission SRA020150
Month 8
Year 2010
Author Guo
Sample Source HeLa
Sample Title Footprint_miR-155_12hr_run1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Inhibitor Cycloheximide
Timepoint 12h
Sex female
Plasmid miR-155 duplex
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR057529 Homo sapiens HeLa Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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