SRR057532 (PRJNA129385)
Processing Status: Completed
General Details
| Sample Name | GSM546930 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 8/2010 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 18817795 |
|---|---|
| Total Bases | 677440620 |
| Total Bases | 677440620 |
Repository Details
| SRA | SRR057532 |
|---|---|
| ENA | SRR057532 |
| BioProject | PRJNA129385 |
Experiment Details
| Title | Footprint_miR-1_12hr_run1 |
|---|
Sample Details
| Run Accession | SRR057532 |
|---|---|
| Total Number Of Spots (Original File)) | 18817795 |
| Total Number Of Bases (Original File) | 677440620 |
| Average Read Length | 36 |
| Original File Size (Mb) | 312 |
| Experiment Id | SRX021976 |
| Library Name | GSM546930: Footprint_miR-1_12hr_run1 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina Genome Analyzer II |
| Sra Project Accession (Srp) | SRP002605 |
| Pubmed Id | 20703300 |
| Sample | SRS079395 |
| Biosample | SAMN00014840 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM546930 |
| Center Name | GEO |
| Submission | SRA020150 |
| Month | 8 |
| Year | 2010 |
| Author | Guo |
| Sample Source | HeLa |
| Sample Title | Footprint_miR-1_12hr_run1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | 12h |
| Sex | female |
| Plasmid | miR-1 duplex |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR057532 | Homo sapiens | HeLa | Ribo-Seq | Cycloheximide |  |
 |
 |
 |
|
|
|||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About