SRR1013478 (PRJNA223060)
Processing Status: Completed
General Details
| Sample Name | GSM1245220 |
|---|---|
| Organism | Mus musculus |
| Release Date | 8/2014 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit GWIPS-viz |
Run Details
| Spots | 7187292 |
|---|---|
| Total Bases | 725916492 |
| Total Bases | 725916492 |
Repository Details
| SRA | SRR1013478 |
|---|---|
| ENA | SRR1013478 |
| BioProject | PRJNA223060 |
Experiment Details
| Title | Tumor RiboTag Profiling A |
|---|
Sample Details
| Run Accession | SRR1013478 |
|---|---|
| Total Number Of Spots (Original File)) | 7187292 |
| Total Number Of Bases (Original File) | 725916492 |
| Average Read Length | 101 |
| Original File Size (Mb) | 452 |
| Experiment Id | SRX365490 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP031501 |
| Pubmed Id | 25122893 |
| Sample | SRS491868 |
| Biosample | SAMN02378257 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM1245220 |
| Center Name | GEO |
| Submission | SRA107313 |
| Month | 8 |
| Year | 2014 |
| Author | Gonzalez |
| Sample Source | tumor |
| Sample Title | Tumor RiboTag Profiling A |
| Replicate-Number | 1.0 |
| Tissue | PDGF/Cre tumor |
| Stage | end-stage |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1013478 | Mus musculus | tumor |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About