SRR1032181 (PRJNA229103)
Processing Status: Completed
General Details
| Sample Name | GSM1267854 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 11/2013 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| View Custom Track |
Run Details
| Spots | 1120322 |
|---|---|
| Total Bases | 42572236 |
| Total Bases | 42572236 |
Repository Details
| SRA | SRR1032181 |
|---|---|
| ENA | SRR1032181 |
| BioProject | PRJNA229103 |
Experiment Details
| Title | Stau1_KnockDown_RibosomeFootprinting_BiolReplica#1 |
|---|
Sample Details
| Run Accession | SRR1032181 |
|---|---|
| Total Number Of Spots (Original File)) | 1120322 |
| Total Number Of Bases (Original File) | 42572236 |
| Average Read Length | 38 |
| Original File Size (Mb) | 47 |
| Experiment Id | SRX378961 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP033119 |
| Pubmed Id | 24336223 |
| Sample | SRS503526 |
| Biosample | SAMN02412428 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1267854 |
| Center Name | GEO |
| Submission | SRA111609 |
| Month | 11 |
| Year | 2013 |
| Author | Ricci |
| Sample Source | Stau1_KnockDown_RibosomeFootprinting_BiolReplica |
| Sample Title | Stau1_KnockDown_RibosomeFootprinting_BiolReplica#1 |
| Library-Type | Ribo-Seq |
| Condition | KD |
| Inhibitor | Cycloheximide |
| Tissue | Kidney |
| Cell-Line | HEK293 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1032181 | Homo sapiens | Stau1_KnockDown_RibosomeFootprinting_BiolReplica | HEK293 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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