SRR1040427 (PRJNA214730)

General Details

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Sample Name MIXED_PARENTAL_RIBOFOOTPRINT_REP2_2
Organism mixed culture
Release Date 12/2013

Sample Links

Run Details

Spots 171400626
Total Bases 6170422536
Total Bases 6170422536

Repository Details

SRA SRR1040427
ENA SRR1040427
BioProject PRJNA214730

Experiment Details

Title Mixed parental ribosome protected fragments replicate 2 lane 2

Sample Details

Run Accession SRR1040427
Total Number Of Spots (Original File)) 171400626
Total Number Of Bases (Original File) 6170422536
Average Read Length 36
Original File Size (Mb) 3873
Experiment Id SRX385187
Library Name MIXED_PARENTAL_MRNA_REP2_2
Library Strategy OTHER
Library Selection unspecified
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP028614
Pubmed Id <NA>
Sample SRS509345
Biosample SAMN02401354
Sample Type simple
Organism Taxid 1306155
Organism mixed culture
Sample Name MIXED_PARENTAL_RIBOFOOTPRINT_REP2_2
Center Name Stanford University
Submission SRA097097
Month 12
Year 2013
Sample Title Mixed parental ribosome protected fragments replicate 2 lane 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Stage log phase
Strain Saccharomyces cerevisiae BY4176 & Saccharomyces paradoxus CBS432
Growth-Condition YPD medium, 30çC
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1040427 mixed culture Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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