SRR10491340 (PRJNA590503)
Processing Status: Completed
General Details
Sample Name | HCT116_SHMT2_2 |
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Organism | Homo sapiens |
Release Date | 1/2020 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 46228496 |
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Total Bases | 3467137200 |
Total Bases | 3467137200 |
Repository Details
SRA | SRR10491340 |
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ENA | SRR10491340 |
BioProject | PRJNA590503 |
Experiment Details
Title | MitoRiboSeq SHMT2 del 2 |
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Sample Details
Run Accession | SRR10491340 |
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Total Number Of Spots (Original File)) | 46228496 |
Total Number Of Bases (Original File) | 3467137200 |
Average Read Length | 75 |
Original File Size (Mb) | 1487 |
Experiment Id | SRX7180458 |
Library Name | mito_t2_2 |
Library Strategy | RNA-Seq |
Library Selection | MNase |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina HiSeq 2500 |
Sra Project Accession (Srp) | SRP230533 |
Pubmed Id | <NA> |
Sample | SRS5687200 |
Biosample | SAMN13331088 |
Sample Type | simple |
Organism Taxid | 9606 |
Organism | Homo sapiens |
Sample Name | HCT116_SHMT2_2 |
Center Name | Princeton University |
Submission | SRA998619 |
Month | 1 |
Year | 2020 |
Sample Title | MitoRiboSeq SHMT2 del 2 |
Library-Type | Ribo-Seq |
Replicate-Number | 2.0 |
Tissue | Colon |
Cell-Line | HCT116 |
Cellular-Compartment | Mitochondrial |
Stage | adult |
Sex | male |
Strain | SHMT2 deletion |
Age | not applicable |
Genotype | shmt2 deletion |
Cancer | colorectal carcinoma |
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