SRR10530116 (PRJNA591625)
Processing Status: Completed
General Details
| Sample Name | GSM4192104 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 11/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 16232035 |
|---|---|
| Total Bases | 811601750 |
| Total Bases | 811601750 |
Repository Details
| SRA | SRR10530116 |
|---|---|
| ENA | SRR10530116 |
| BioProject | PRJNA591625 |
Experiment Details
| Title | H9.KO1.1.1_Ribo-seq |
|---|
Sample Details
| Run Accession | SRR10530116 |
|---|---|
| Total Number Of Spots (Original File)) | 16232035 |
| Total Number Of Bases (Original File) | 811601750 |
| Average Read Length | 50 |
| Original File Size (Mb) | 354 |
| Experiment Id | SRX7214129 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 4000 |
| Sra Project Accession (Srp) | SRP233222 |
| Pubmed Id | 33330931 |
| Sample | SRS5716932 |
| Biosample | SAMN13385731 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM4192104 |
| Center Name | GEO |
| Submission | SRA1002630 |
| Month | 11 |
| Year | 2020 |
| Author | Selmi |
| Sample Source | human embryonic stem cells |
| Sample Title | H9.KO1.1.1_Ribo-seq |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Tissue | Embryo |
| Cell-Line | H9 |
| Genotype | Nsun6 knockout (Clone 1 nucleotide indel exon2) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR10530116 | Homo sapiens | human embryonic stem cells | H9 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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