SRR1062198 (PRJNA232649)

Processing Status: Completed

General Details

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Sample Name GSM1299080
Organism Danio rerio
Release Date 4/2014

Sample Links

Run Details

Spots 2831746
Total Bases 215212696
Total Bases 215212696

Repository Details

SRA SRR1062198
ENA SRR1062198
BioProject PRJNA232649

Experiment Details

Title 5h RPFs column replicate 1 run 1

Sample Details

Run Accession SRR1062198
Total Number Of Spots (Original File)) 2831746
Total Number Of Bases (Original File) 215212696
Average Read Length 76
Original File Size (Mb) 146
Experiment Id SRX399799
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP034750
Pubmed Id 24705786
Sample SRS520090
Biosample SAMN02486852
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM1299080
Center Name GEO
Submission SRA122405
Month 4
Year 2014
Author Bazzini
Sample Source Whole embryos
Sample Title 5h RPFs column replicate 1 run 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Inhibitor Cycloheximide
Tissue Embryo
Stage 5hpf
Strain TUAB
Mode Of Separation column
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1062198 Danio rerio Whole embryos Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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