SRR1062811 (PRJNA232649)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM1299109 |
|---|---|
| Organism | Danio rerio |
| Release Date | 4/2014 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 129516 |
|---|---|
| Total Bases | 9843216 |
| Total Bases | 9843216 |
Repository Details
| SRA | SRR1062811 |
|---|---|
| ENA | SRR1062811 |
| BioProject | PRJNA232649 |
Experiment Details
| Title | 2h RPFs run 3 |
|---|
Sample Details
| Run Accession | SRR1062811 |
|---|---|
| Total Number Of Spots (Original File)) | 129516 |
| Total Number Of Bases (Original File) | 9843216 |
| Average Read Length | 76 |
| Original File Size (Mb) | 6 |
| Experiment Id | SRX399828 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP034750 |
| Pubmed Id | 24705786 |
| Sample | SRS520119 |
| Biosample | SAMN02486881 |
| Sample Type | simple |
| Organism Taxid | 7955 |
| Organism | Danio rerio |
| Sample Name | GSM1299109 |
| Center Name | GEO |
| Submission | SRA122405 |
| Month | 4 |
| Year | 2014 |
| Author | Bazzini |
| Sample Source | Whole embryos |
| Sample Title | 2h RPFs run 3 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 3.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Tissue | Embryo |
| Stage | 48hpf |
| Strain | TUAB |
| Mode Of Separation | column |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1062811 | Danio rerio | Whole embryos | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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