SRR1062816 (PRJNA232649)

Processing Status: Completed

General Details

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Sample Name GSM1299109
Organism Danio rerio
Release Date 4/2014

Sample Links

Run Details

Spots 4000000
Total Bases 304000000
Total Bases 304000000

Repository Details

SRA SRR1062816
ENA SRR1062816
BioProject PRJNA232649

Experiment Details

Title 2h RPFs run 3

Sample Details

Run Accession SRR1062816
Total Number Of Spots (Original File)) 4000000
Total Number Of Bases (Original File) 304000000
Average Read Length 76
Original File Size (Mb) 170
Experiment Id SRX399828
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP034750
Pubmed Id 24705786
Sample SRS520119
Biosample SAMN02486881
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM1299109
Center Name GEO
Submission SRA122405
Month 4
Year 2014
Author Bazzini
Sample Source Whole embryos
Sample Title 2h RPFs run 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Condition Test
Inhibitor Cycloheximide
Tissue Embryo
Stage 12hpf
Strain TUAB
Mode Of Separation column
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1062816 Danio rerio Whole embryos Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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