SRR10803858 (PRJNA598159)
Processing Status: Completed
General Details
| Sample Name | mc3_w_SET1 |
|---|---|
| Organism | Mus musculus |
| Release Date | 12/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 70365566 |
|---|---|
| Total Bases | 4573761790 |
| Total Bases | 4573761790 |
Repository Details
| SRA | SRR10803858 |
|---|---|
| ENA | SRR10803858 |
| BioProject | PRJNA598159 |
Experiment Details
| Title | Ribo-seq with OligoSET1 on 3Mice-Combined S3 |
|---|
Sample Details
| Run Accession | SRR10803858 |
|---|---|
| Total Number Of Spots (Original File)) | 70365566 |
| Total Number Of Bases (Original File) | 4573761790 |
| Average Read Length | 65 |
| Original File Size (Mb) | 2104 |
| Experiment Id | SRX7477734 |
| Library Name | mc3_w_SET1 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP239066 |
| Pubmed Id | <NA> |
| Sample | SRS5921347 |
| Biosample | SAMN13699220 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | mc3_w_SET1 |
| Center Name | Netherlands Cancer Institute |
| Submission | SRA1017700 |
| Month | 12 |
| Year | 2020 |
| Sample Title | Ribo-seq with OligoSET1 on 3Mice-Combined S3 |
| Library-Type | Ribo-Seq |
| Tissue | intestin |
| Stage | Mixed Adults |
| Sex | Mix of male/female |
| Strain | C57BL/6 |
| Genotype | VillinCre.ERT2.RPL22.HA |
| Kit Used | SET-1 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR10803858 | Mus musculus | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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