SRR11836450 (PRJNA634689)
Processing Status: Completed
General Details
| Sample Name | Atg12KO;fed conditions |
|---|---|
| Organism | Mus musculus |
| Release Date | 5/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 140445387 |
|---|---|
| Total Bases | 7022269350 |
| Total Bases | 7022269350 |
Repository Details
| SRA | SRR11836450 |
|---|---|
| ENA | SRR11836450 |
| BioProject | PRJNA634689 |
Experiment Details
| Title |
|---|
Sample Details
| Run Accession | SRR11836450 |
|---|---|
| Total Number Of Spots (Original File)) | 140445387 |
| Total Number Of Bases (Original File) | 7022269350 |
| Average Read Length | 50 |
| Original File Size (Mb) | 2221 |
| Experiment Id | SRX8386867 |
| Library Name | rpf_KO_fed |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP263114 |
| Pubmed Id | <NA> |
| Sample | SRS6700665 |
| Biosample | SAMN15005045 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | Atg12KO;fed conditions |
| Center Name | University of California, San Francisco |
| Submission | SRA1079135 |
| Month | 5 |
| Year | 2020 |
| Condition | KO |
| Tissue | Embryo |
| Cell-Line | Fibroblast |
| Stage | E13.5 |
| Strain | C57BL/6 |
| Genotype | Atg12f/f;CagCreER |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR11836450 | Mus musculus | Fibroblast |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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