SRR12228563 (PRJNA646476)

Processing Status: Completed

General Details

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Sample Name GSM4672169
Organism Mus musculus
Release Date 4/2021

Sample Links

Run Details

Spots 18842587
Total Bases 960971937
Total Bases 960971937

Repository Details

SRA SRR12228563
ENA SRR12228563
BioProject PRJNA646476

Experiment Details

Title Ribo-seq WT6

Sample Details

Run Accession SRR12228563
Total Number Of Spots (Original File)) 18842587
Total Number Of Bases (Original File) 960971937
Average Read Length 51
Original File Size (Mb) 640
Experiment Id SRX8737134
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP272078
Pubmed Id 33970232
Sample SRS7009733
Biosample SAMN15543520
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM4672169
Center Name GEO
Submission SRA1099399
Month 4
Year 2021
Author Hu
Sample Source Activated CD19+ B cells
Sample Title Ribo-seq WT6
Library-Type Ribo-Seq
Replicate-Number 6.0
Condition Wild Type
Tissue Peripheral and mesenteric LN
Cell-Line LN CD19+ B cells
Sex female
Strain C57BL/6
Genotype Zfp36l1 (fl/fl) control
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12228563 Mus musculus Activated CD19+ B cells LN CD19+ B cells Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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