SRR12343630 (PRJNA649426)
Processing Status: Completed
General Details
| Sample Name | ControlIAA15_FP_r3T |
|---|---|
| Organism | Arabidopsis thaliana |
| Release Date | 7/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| View Custom Track |
Run Details
| Spots | 86416720 |
|---|---|
| Total Bases | 10047859990 |
| Total Bases | 10047859990 |
Repository Details
| SRA | SRR12343630 |
|---|---|
| ENA | SRR12343630 |
| BioProject | PRJNA649426 |
Experiment Details
| Title | Ribo footprints samples of control auxin seedlings at 15mins auxin-Replicate 3 |
|---|
Sample Details
| Run Accession | SRR12343630 |
|---|---|
| Total Number Of Spots (Original File)) | 86416720 |
| Total Number Of Bases (Original File) | 10047859990 |
| Average Read Length | 116 |
| Original File Size (Mb) | 3303 |
| Experiment Id | SRX8843389 |
| Library Name | ControlIAA15_FP_r3T |
| Library Strategy | OTHER |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP274100 |
| Pubmed Id | <NA> |
| Sample | SRS7106448 |
| Biosample | SAMN15666627 |
| Sample Type | simple |
| Organism Taxid | 3702 |
| Organism | Arabidopsis thaliana |
| Sample Name | ControlIAA15_FP_r3T |
| Center Name | North Carolina State University |
| Submission | SRA1105201 |
| Month | 7 |
| Year | 2020 |
| Sample Title | Ribo footprints samples of control auxin seedlings at 15mins auxin-Replicate 3 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 3.0 |
| Condition | Wild Type |
| Tissue | Seedling |
| Cellular-Compartment | Auxin |
| Stage | Etiolated seedling |
| Age | Three-day-old |
| Temperature | 22C |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR12343630 | Arabidopsis thaliana | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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