SRR12343633 (PRJNA649426)

General Details

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Sample Name ControlIAA15_FP_r2T
Organism Arabidopsis thaliana
Release Date 7/2020

Sample Links

Run Details

Spots 4538898
Total Bases 326800656
Total Bases 326800656

Repository Details

SRA SRR12343633
ENA SRR12343633
BioProject PRJNA649426

Experiment Details

Title Ribo footprints samples of control auxin seedlings at 15mins auxin-Replicate 2

Sample Details

Run Accession SRR12343633
Total Number Of Spots (Original File)) 4538898
Total Number Of Bases (Original File) 326800656
Average Read Length 72
Original File Size (Mb) 120
Experiment Id SRX8843386
Library Name ControlIAA15_FP_r2T
Library Strategy OTHER
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP274100
Pubmed Id <NA>
Sample SRS7106445
Biosample SAMN15666626
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name ControlIAA15_FP_r2T
Center Name North Carolina State University
Submission SRA1105201
Month 7
Year 2020
Sample Title Ribo footprints samples of control auxin seedlings at 15mins auxin-Replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Wild Type
Tissue Seedling
Cellular-Compartment Auxin
Stage Etiolated seedling
Age Three-day-old
Temperature 22C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12343633 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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