SRR12343635 (PRJNA649426)

Processing Status: Completed

General Details

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Sample Name IAA4_FP_r3T
Organism Arabidopsis thaliana
Release Date 7/2020

Sample Links

Run Details

Spots 11080571
Total Bases 797801112
Total Bases 797801112

Repository Details

SRA SRR12343635
ENA SRR12343635
BioProject PRJNA649426

Experiment Details

Title Ribo footprint samples of auxin treated seedlings at 4hs-Replicate 3

Sample Details

Run Accession SRR12343635
Total Number Of Spots (Original File)) 11080571
Total Number Of Bases (Original File) 797801112
Average Read Length 72
Original File Size (Mb) 270
Experiment Id SRX8843384
Library Name IAA4_FP_r3T
Library Strategy OTHER
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP274100
Pubmed Id <NA>
Sample SRS7106443
Biosample SAMN15666687
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name IAA4_FP_r3T
Center Name North Carolina State University
Submission SRA1105201
Month 7
Year 2020
Sample Title Ribo footprint samples of auxin treated seedlings at 4hs-Replicate 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Condition Test
Tissue Seedling
Cellular-Compartment Auxin
Stage Etiolated seedling
Age Three-day-old
Temperature 22C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12343635 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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