SRR12343636 (PRJNA649426)

General Details

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Sample Name IAA4_FP_r2T
Organism Arabidopsis thaliana
Release Date 7/2020

Sample Links

Run Details

Spots 12090276
Total Bases 870499872
Total Bases 870499872

Repository Details

SRA SRR12343636
ENA SRR12343636
BioProject PRJNA649426

Experiment Details

Title Ribo footprint samples of auxin treated seedlings at 4hs-Replicate 2

Sample Details

Run Accession SRR12343636
Total Number Of Spots (Original File)) 12090276
Total Number Of Bases (Original File) 870499872
Average Read Length 72
Original File Size (Mb) 318
Experiment Id SRX8843383
Library Name IAA4_FP_r2T
Library Strategy OTHER
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP274100
Pubmed Id <NA>
Sample SRS7106442
Biosample SAMN15666686
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name IAA4_FP_r2T
Center Name North Carolina State University
Submission SRA1105201
Month 7
Year 2020
Sample Title Ribo footprint samples of auxin treated seedlings at 4hs-Replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Test
Tissue Seedling
Cellular-Compartment Auxin
Stage Etiolated seedling
Age Three-day-old
Temperature 22C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12343636 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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