SRR12343650 (PRJNA649426)

Processing Status: Completed

General Details

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Sample Name IAA24_FP_r1T
Organism Arabidopsis thaliana
Release Date 7/2020

Sample Links

Run Details

Spots 37459282
Total Bases 2697068304
Total Bases 2697068304

Repository Details

SRA SRR12343650
ENA SRR12343650
BioProject PRJNA649426

Experiment Details

Title Ribo footprint samples of auxin treated seedlings at 24h-Replicate 1

Sample Details

Run Accession SRR12343650
Total Number Of Spots (Original File)) 37459282
Total Number Of Bases (Original File) 2697068304
Average Read Length 72
Original File Size (Mb) 920
Experiment Id SRX8843369
Library Name IAA24_FP_r1T
Library Strategy OTHER
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP274100
Pubmed Id <NA>
Sample SRS7106428
Biosample SAMN15666673
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name IAA24_FP_r1T
Center Name North Carolina State University
Submission SRA1105201
Month 7
Year 2020
Sample Title Ribo footprint samples of auxin treated seedlings at 24h-Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Tissue Seedling
Cellular-Compartment Auxin
Stage Etiolated seedling
Age Three-day-old
Temperature 22C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12343650 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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