SRR12343674 (PRJNA649426)

General Details

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Sample Name ControlIAA4_FP_r3T
Organism Arabidopsis thaliana
Release Date 7/2020

Sample Links

Run Details

Spots 9852849
Total Bases 709405128
Total Bases 709405128

Repository Details

SRA SRR12343674
ENA SRR12343674
BioProject PRJNA649426

Experiment Details

Title Ribo footprint samples of control auxin seedlings at 4hs-Replicate 3

Sample Details

Run Accession SRR12343674
Total Number Of Spots (Original File)) 9852849
Total Number Of Bases (Original File) 709405128
Average Read Length 72
Original File Size (Mb) 239
Experiment Id SRX8843345
Library Name ControlIAA4_FP_r3T
Library Strategy OTHER
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP274100
Pubmed Id <NA>
Sample SRS7106404
Biosample SAMN15666651
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name ControlIAA4_FP_r3T
Center Name North Carolina State University
Submission SRA1105201
Month 7
Year 2020
Sample Title Ribo footprint samples of control auxin seedlings at 4hs-Replicate 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Condition Wild Type
Tissue Seedling
Cellular-Compartment Auxin
Stage Etiolated seedling
Age Three-day-old
Temperature 22C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12343674 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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