SRR12343695 (PRJNA649426)

Processing Status: Completed

General Details

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Sample Name ControlIAA1_FP_r2T
Organism Arabidopsis thaliana
Release Date 7/2020

Sample Links

Run Details

Spots 18927660
Total Bases 1362791520
Total Bases 1362791520

Repository Details

SRA SRR12343695
ENA SRR12343695
BioProject PRJNA649426

Experiment Details

Title Ribo footprint samples of control auxin seedlings at 1h-Replicate 2

Sample Details

Run Accession SRR12343695
Total Number Of Spots (Original File)) 18927660
Total Number Of Bases (Original File) 1362791520
Average Read Length 72
Original File Size (Mb) 495
Experiment Id SRX8843324
Library Name ControlIAA1_FP_r2T
Library Strategy OTHER
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP274100
Pubmed Id <NA>
Sample SRS7106383
Biosample SAMN15666632
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name ControlIAA1_FP_r2T
Center Name North Carolina State University
Submission SRA1105201
Month 7
Year 2020
Sample Title Ribo footprint samples of control auxin seedlings at 1h-Replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Wild Type
Tissue Seedling
Cellular-Compartment Auxin
Stage Etiolated seedling
Age Three-day-old
Temperature 22C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12343695 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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