SRR12381561 (PRJNA598159)
Processing Status: Completed
General Details
| Sample Name | mc10_w_RiboZero |
|---|---|
| Organism | Mus musculus |
| Release Date | 12/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 19958828 |
|---|---|
| Total Bases | 1297323820 |
| Total Bases | 1297323820 |
Repository Details
| SRA | SRR12381561 |
|---|---|
| ENA | SRR12381561 |
| BioProject | PRJNA598159 |
Experiment Details
| Title | Ribo-seq with RiboZero on mice-10 |
|---|
Sample Details
| Run Accession | SRR12381561 |
|---|---|
| Total Number Of Spots (Original File)) | 19958828 |
| Total Number Of Bases (Original File) | 1297323820 |
| Average Read Length | 65 |
| Original File Size (Mb) | 548 |
| Experiment Id | SRX8880245 |
| Library Name | mc10_w_RiboZero |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP239066 |
| Pubmed Id | <NA> |
| Sample | SRS7140295 |
| Biosample | SAMN15719510 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | mc10_w_RiboZero |
| Center Name | Netherlands Cancer Institute |
| Submission | SRA1107443 |
| Month | 12 |
| Year | 2020 |
| Sample Title | Ribo-seq with RiboZero on mice-10 |
| Library-Type | Ribo-Seq |
| Tissue | intestin |
| Stage | Adult |
| Sex | male |
| Strain | C57BL/6 |
| Genotype | Lgr5Cre.ERT2.Rptor.fl/fl.RPL22.HA |
| Kit Used | RiboZero |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR12381561 | Mus musculus | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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