SRR12381562 (PRJNA598159)

Processing Status: Completed

General Details

View quality reports

Sample Name mc9_w_RiboZero
Organism Mus musculus
Release Date 12/2020

Sample Links

Run Details

Spots 24901892
Total Bases 1618622980
Total Bases 1618622980

Repository Details

SRA SRR12381562
ENA SRR12381562
BioProject PRJNA598159

Experiment Details

Title Ribo-seq with RiboZero on mice-9

Sample Details

Run Accession SRR12381562
Total Number Of Spots (Original File)) 24901892
Total Number Of Bases (Original File) 1618622980
Average Read Length 65
Original File Size (Mb) 627
Experiment Id SRX8880244
Library Name mc9_w_RiboZero
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP239066
Pubmed Id <NA>
Sample SRS7140294
Biosample SAMN15719509
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name mc9_w_RiboZero
Center Name Netherlands Cancer Institute
Submission SRA1107443
Month 12
Year 2020
Sample Title Ribo-seq with RiboZero on mice-9
Library-Type Ribo-Seq
Tissue intestin
Stage Adult
Sex female
Strain C57BL/6
Genotype Lgr5Cre.ERT2.Rptor.fl/fl.RPL22.HA
Kit Used RiboZero
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12381562 Mus musculus Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About