SRR12381563 (PRJNA598159)

Processing Status: Completed

General Details

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Sample Name mc7_w_SET3
Organism Mus musculus
Release Date 12/2020

Sample Links

Run Details

Spots 42612026
Total Bases 2769781690
Total Bases 2769781690

Repository Details

SRA SRR12381563
ENA SRR12381563
BioProject PRJNA598159

Experiment Details

Title Ribo-seq with OligoSET3 on mice-7

Sample Details

Run Accession SRR12381563
Total Number Of Spots (Original File)) 42612026
Total Number Of Bases (Original File) 2769781690
Average Read Length 65
Original File Size (Mb) 1302
Experiment Id SRX8880242
Library Name mc7_w_SET3
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP239066
Pubmed Id <NA>
Sample SRS7140292
Biosample SAMN15719507
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name mc7_w_SET3
Center Name Netherlands Cancer Institute
Submission SRA1107443
Month 12
Year 2020
Sample Title Ribo-seq with OligoSET3 on mice-7
Library-Type Ribo-Seq
Tissue intestin
Stage Adult
Sex female
Strain C57BL/6
Genotype Lgr5Cre.ERT2.Rptor.fl/fl.RPL22.HA
Kit Used SET-3
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12381563 Mus musculus Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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