SRR12381565 (PRJNA598159)

Processing Status: Completed

General Details

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Sample Name org1_RiboCop
Organism Mus musculus
Release Date 12/2020

Sample Links

Run Details

Spots 3633057
Total Bases 236148705
Total Bases 236148705

Repository Details

SRA SRR12381565
ENA SRR12381565
BioProject PRJNA598159

Experiment Details

Title Ribo-seq with RiboCop on Organoid-1

Sample Details

Run Accession SRR12381565
Total Number Of Spots (Original File)) 3633057
Total Number Of Bases (Original File) 236148705
Average Read Length 65
Original File Size (Mb) 133
Experiment Id SRX8880241
Library Name org1_RiboCop
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP239066
Pubmed Id <NA>
Sample SRS7140291
Biosample SAMN15719506
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name org1_RiboCop
Center Name Netherlands Cancer Institute
Submission SRA1107443
Month 12
Year 2020
Sample Title Ribo-seq with RiboCop on Organoid-1
Library-Type Ribo-Seq
Tissue intestin
Stage Adult
Sex female
Strain C57BL/6
Genotype VillinCre.ERT2.RPL22.HA
Kit Used RiboCop
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12381565 Mus musculus Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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