SRR12381566 (PRJNA598159)

Processing Status: Completed

General Details

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Sample Name org2_SET1
Organism Mus musculus
Release Date 12/2020

Sample Links

Run Details

Spots 62294963
Total Bases 4049172595
Total Bases 4049172595

Repository Details

SRA SRR12381566
ENA SRR12381566
BioProject PRJNA598159

Experiment Details

Title Ribo-seq with OligoSET1 on Organoid-2

Sample Details

Run Accession SRR12381566
Total Number Of Spots (Original File)) 62294963
Total Number Of Bases (Original File) 4049172595
Average Read Length 65
Original File Size (Mb) 1969
Experiment Id SRX8880240
Library Name org2_SET1
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP239066
Pubmed Id <NA>
Sample SRS7140290
Biosample SAMN15719505
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name org2_SET1
Center Name Netherlands Cancer Institute
Submission SRA1107443
Month 12
Year 2020
Sample Title Ribo-seq with OligoSET1 on Organoid-2
Library-Type Ribo-Seq
Tissue intestin
Stage Adult
Sex male
Strain C57BL/6
Genotype VillinCre.ERT2.RPL22.HA
Kit Used SET-1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12381566 Mus musculus Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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