SRR12660873 (PRJNA664116)
Processing Status: Completed
General Details
| Sample Name | GSM4793172 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 8/2021 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| View Custom Track |
Run Details
| Spots | 64435036 |
|---|---|
| Total Bases | 1933905331 |
| Total Bases | 1933905331 |
Repository Details
| SRA | SRR12660873 |
|---|---|
| ENA | SRR12660873 |
| BioProject | PRJNA664116 |
Experiment Details
| Title | Ribo-Seq siCNOT1 Replicate 2 |
|---|
Sample Details
| Run Accession | SRR12660873 |
|---|---|
| Total Number Of Spots (Original File)) | 64435036 |
| Total Number Of Bases (Original File) | 1933905331 |
| Average Read Length | 30 |
| Original File Size (Mb) | 884 |
| Experiment Id | SRX9141925 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP282906 |
| Pubmed Id | 34615539 |
| Sample | SRS7383237 |
| Biosample | SAMN16198230 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM4793172 |
| Center Name | GEO |
| Submission | SRA1127134 |
| Month | 8 |
| Year | 2021 |
| Author | Gillen |
| Sample Source | HEK293 cells |
| Sample Title | Ribo-Seq siCNOT1 Replicate 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Tissue | Kidney |
| Cell-Line | HEK293 |
| Sirna | CNOT1 siRNA |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR12660873 | Homo sapiens | HEK293 cells | HEK293 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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