SRR12672555 (PRJNA611824)

Processing Status: Not Yet Started

General Details

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Sample Name shPDCD4_PC12
Organism Rattus norvegicus
Release Date 9/2020

Sample Links

Run Details

Spots 49419008
Total Bases 4941900800
Total Bases 4941900800

Repository Details

SRA SRR12672555
ENA SRR12672555
BioProject PRJNA611824

Experiment Details

Title RNA-Seq and Ribo-Seq from NGF-exposed shPDCD4-PC12 cells

Sample Details

Run Accession SRR12672555
Total Number Of Spots (Original File)) 49419008
Total Number Of Bases (Original File) 4941900800
Average Read Length 100
Original File Size (Mb) 2983
Experiment Id SRX9152749
Library Name polyA-shPDCD4-2
Library Strategy RNA-Seq
Library Selection Oligo-dT
Library Source TRANSCRIPTOMIC
Library Layout PAIRED
Insert Size 0
Insert Deviation 0
Platform BGISEQ
Model BGISEQ-500
Sra Project Accession (Srp) SRP283892
Pubmed Id <NA>
Sample SRS7392736
Biosample SAMN14350880
Sample Type simple
Organism Taxid 10116
Organism Rattus norvegicus
Sample Name shPDCD4_PC12
Center Name Instituto de Investigaciones Biologicas Clemente Estable
Submission SRA1128123
Month 9
Year 2020
Sample Title RNA-Seq and Ribo-Seq from NGF-exposed shPDCD4-PC12 cells
Tissue not applicable
Sex male
Strain PC12
Age 72hs of NGF exposure
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12672555 Rattus norvegicus
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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