SRR1272138 (PRJNA246300)

Processing Status: Completed

General Details

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Sample Name GSM1379704
Organism Trypanosoma brucei
Release Date 5/2014

Sample Links

Run Details

Spots 69724475
Total Bases 2510081100
Total Bases 2510081100

Repository Details

SRA SRR1272138
ENA SRR1272138
BioProject PRJNA246300

Experiment Details

Title cBF RiboProf replicate_3

Sample Details

Run Accession SRR1272138
Total Number Of Spots (Original File)) 69724475
Total Number Of Bases (Original File) 2510081100
Average Read Length 36
Original File Size (Mb) 1488
Experiment Id SRX533756
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP041705
Pubmed Id 25331479
Sample SRS602484
Biosample SAMN02746311
Sample Type simple
Organism Taxid 5691
Organism Trypanosoma brucei
Sample Name GSM1379704
Center Name GEO
Submission SRA161745
Month 5
Year 2014
Author Jensen
Sample Source Tb427 grown in vitro in HMI-9 medium
Sample Title cBF RiboProf replicate_3
Library-Type Ribo-Seq
Stage cultrured bloodstream Form
Strain 427
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1272138 Trypanosoma brucei Tb427 grown in vitro in HMI-9 medium Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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