SRR1333394 (PRJNA251587)

General Details

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Sample Name GSM1403308
Organism Homo sapiens
Release Date 12/2014

Sample Links

Run Details

Spots 158957695
Total Bases 7947884750
Total Bases 7947884750

Repository Details

SRA SRR1333394
ENA SRR1333394
BioProject PRJNA251587

Experiment Details

Title Lactimidomycin treated HCT116

Sample Details

Run Accession SRR1333394
Total Number Of Spots (Original File)) 158957695
Total Number Of Bases (Original File) 7947884750
Average Read Length 50
Original File Size (Mb) 3505
Experiment Id SRX569215
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP042937
Pubmed Id 25510491
Sample SRS627193
Biosample SAMN02837521
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM1403308
Center Name GEO
Submission SRA169092
Month 12
Year 2014
Author Crappé
Sample Source Colorectal carcinoma cell line
Sample Title Lactimidomycin treated HCT116
Library-Type Ribo-Seq
Inhibitor Lactimidomycin
Tissue Colon
Cell-Line HCT116
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1333394 Homo sapiens Colorectal carcinoma cell line HCT116 Ribo-Seq Lactimidomycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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