SRR1333394 (PRJNA251587)
Processing Status: Completed
General Details
| Sample Name | GSM1403308 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 12/2014 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 158957695 |
|---|---|
| Total Bases | 7947884750 |
| Total Bases | 7947884750 |
Repository Details
| SRA | SRR1333394 |
|---|---|
| ENA | SRR1333394 |
| BioProject | PRJNA251587 |
Experiment Details
| Title | Lactimidomycin treated HCT116 |
|---|
Sample Details
| Run Accession | SRR1333394 |
|---|---|
| Total Number Of Spots (Original File)) | 158957695 |
| Total Number Of Bases (Original File) | 7947884750 |
| Average Read Length | 50 |
| Original File Size (Mb) | 3505 |
| Experiment Id | SRX569215 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP042937 |
| Pubmed Id | 25510491 |
| Sample | SRS627193 |
| Biosample | SAMN02837521 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1403308 |
| Center Name | GEO |
| Submission | SRA169092 |
| Month | 12 |
| Year | 2014 |
| Author | Crappé |
| Sample Source | Colorectal carcinoma cell line |
| Sample Title | Lactimidomycin treated HCT116 |
| Library-Type | Ribo-Seq |
| Inhibitor | Lactimidomycin |
| Tissue | Colon |
| Cell-Line | HCT116 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1333394 | Homo sapiens | Colorectal carcinoma cell line | HCT116 | Ribo-Seq | Lactimidomycin |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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