SRR13858943 (PRJNA706704)
Processing Status: Failed
General Details
| Sample Name | GSM5135226 |
|---|---|
| Organism | Staphylococcus aureus |
| Release Date | 1/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 44689327 |
|---|---|
| Total Bases | 2234466350 |
| Total Bases | 2234466350 |
Repository Details
| SRA | SRR13858943 |
|---|---|
| ENA | SRR13858943 |
| BioProject | PRJNA706704 |
Experiment Details
| Title | YP10_RPF_KES34_rep3 |
|---|
Sample Details
| Run Accession | SRR13858943 |
|---|---|
| Total Number Of Spots (Original File)) | 44689327 |
| Total Number Of Bases (Original File) | 2234466350 |
| Average Read Length | 50 |
| Original File Size (Mb) | 647 |
| Experiment Id | SRX10239939 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP309329 |
| Pubmed Id | 38252661 |
| Sample | SRS8381345 |
| Biosample | SAMN18140844 |
| Sample Type | simple |
| Organism Taxid | 1280 |
| Organism | Staphylococcus aureus |
| Sample Name | GSM5135226 |
| Center Name | GEO |
| Submission | SRA1203083 |
| Month | 1 |
| Year | 2024 |
| Author | Shields |
| Sample Source | YP10_RPF_KES34_bacterial cells |
| Sample Title | YP10_RPF_KES34_rep3 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 3.0 |
| Stage | Exponentially grown |
| Strain | USA300_FPR3757 |
| Genotype | KES34 (unmodified ribosomes) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR13858943 | Staphylococcus aureus | YP10_RPF_KES34_bacterial cells | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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