SRR13998265 (PRJNA715464)

Processing Status: Completed

General Details

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Sample Name GSM5179371
Organism Danio rerio
Release Date 6/2022

Sample Links

Run Details

Spots 57680212
Total Bases 8652031800
Total Bases 8652031800

Repository Details

SRA SRR13998265
ENA SRR13998265
BioProject PRJNA715464

Experiment Details

Title ribosomes 4h KO rep1

Sample Details

Run Accession SRR13998265
Total Number Of Spots (Original File)) 57680212
Total Number Of Bases (Original File) 8652031800
Average Read Length 150
Original File Size (Mb) 3222
Experiment Id SRX10375629
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP311222
Pubmed Id <NA>
Sample SRS8490235
Biosample SAMN18350495
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM5179371
Center Name GEO
Submission SRA1207785
Month 6
Year 2022
Sample Source Ddx3xb mutant 4h ribo-seq rep1
Sample Title ribosomes 4h KO rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition KO
Timepoint 4h
Tissue Embryo
Age 4 hpf
Genotype Ddx3xb-/Ddx3xb-
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR13998265 Danio rerio Ddx3xb mutant 4h ribo-seq rep1 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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