SRR15049345 (PRJNA744147)
Processing Status: Completed
General Details
| Sample Name | GSM5419825 |
|---|---|
| Organism | Mus musculus |
| Release Date | 12/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 31841660 |
|---|---|
| Total Bases | 1623924660 |
| Total Bases | 1623924660 |
Repository Details
| SRA | SRR15049345 |
|---|---|
| ENA | SRR15049345 |
| BioProject | PRJNA744147 |
Experiment Details
| Title | Ribo-seq HrasG12V; Tgfbr2 KO (SCC) |
|---|
Sample Details
| Run Accession | SRR15049345 |
|---|---|
| Total Number Of Spots (Original File)) | 31841660 |
| Total Number Of Bases (Original File) | 1623924660 |
| Average Read Length | 51 |
| Original File Size (Mb) | 536 |
| Experiment Id | SRX11359838 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP327136 |
| Pubmed Id | 36550360 |
| Sample | SRS9406202 |
| Biosample | SAMN20079908 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM5419825 |
| Center Name | GEO |
| Submission | SRA1254933 |
| Month | 12 |
| Year | 2022 |
| Author | Weber |
| Sample Source | Primary keratinocytes from P0 back skin |
| Sample Title | Ribo-seq HrasG12V; Tgfbr2 KO (SCC) |
| Library-Type | Ribo-Seq |
| Condition | KO |
| Tissue | Skin |
| Cell-Line | Primary keratinocytes from P0 back skin |
| Cellular-Compartment | Ribosome protected RNA fragments |
| Age | Passage 10-15 |
| Genotype | HrasG12V; Tgfbr2 fl/fl KO |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR15049345 | Mus musculus | Primary keratinocytes from P0 back skin | Primary keratinocytes from P0 back skin | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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