SRR15049345 (PRJNA744147)

Processing Status: Completed

General Details

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Sample Name GSM5419825
Organism Mus musculus
Release Date 12/2022

Sample Links

Run Details

Spots 31841660
Total Bases 1623924660
Total Bases 1623924660

Repository Details

SRA SRR15049345
ENA SRR15049345
BioProject PRJNA744147

Experiment Details

Title Ribo-seq HrasG12V; Tgfbr2 KO (SCC)

Sample Details

Run Accession SRR15049345
Total Number Of Spots (Original File)) 31841660
Total Number Of Bases (Original File) 1623924660
Average Read Length 51
Original File Size (Mb) 536
Experiment Id SRX11359838
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP327136
Pubmed Id 36550360
Sample SRS9406202
Biosample SAMN20079908
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM5419825
Center Name GEO
Submission SRA1254933
Month 12
Year 2022
Author Weber
Sample Source Primary keratinocytes from P0 back skin
Sample Title Ribo-seq HrasG12V; Tgfbr2 KO (SCC)
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition KO
Inhibitor 0.0
Timepoint NANA
Tissue Skin
Cell-Line NA_Primary keratinocytes from P0 back skin
Cellular-Compartment Ribosome protected RNA fragments
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age Passage 10-15
Infected 0.0
Disease 0.0
Genotype HrasG12V; Tgfbr2 fl/fl KO
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR15049345 Mus musculus Primary keratinocytes from P0 back skin NA_Primary keratinocytes from P0 back skin Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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