SRR1557709 (PRJNA259424)
Processing Status: Failed
General Details
| Sample Name | GSM1487101 |
|---|---|
| Organism | Rattus norvegicus |
| Release Date | 7/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 124053630 |
|---|---|
| Total Bases | 6078627870 |
| Total Bases | 6078627870 |
Repository Details
| SRA | SRR1557709 |
|---|---|
| ENA | SRR1557709 |
| BioProject | PRJNA259424 |
Experiment Details
| Title | 40 min. OGD, ribo-seq, replicate #1 |
|---|
Sample Details
| Run Accession | SRR1557709 |
|---|---|
| Total Number Of Spots (Original File)) | 124053630 |
| Total Number Of Bases (Original File) | 6078627870 |
| Average Read Length | 49 |
| Original File Size (Mb) | 3588 |
| Experiment Id | SRX686497 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP045777 |
| Pubmed Id | 25943107 |
| Sample | SRS689314 |
| Biosample | SAMN03008632 |
| Sample Type | simple |
| Organism Taxid | 10116 |
| Organism | Rattus norvegicus |
| Sample Name | GSM1487101 |
| Center Name | GEO |
| Submission | SRA180312 |
| Month | 7 |
| Year | 2015 |
| Author | Andreev |
| Sample Source | PC12 |
| Sample Title | 40 min. OGD, ribo-seq, replicate #1 |
| Library-Type | Ribo-Seq |
| Cell-Line | PC12 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1557709 | Rattus norvegicus | PC12 | PC12 | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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