SRR1583084 (PRJNA261698)
Processing Status: Failed
General Details
| Sample Name | GSM1509453 |
|---|---|
| Organism | Escherichia coli |
| Release Date | 11/2014 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 23465502 |
|---|---|
| Total Bases | 1196740602 |
| Total Bases | 1196740602 |
Repository Details
| SRA | SRR1583084 |
|---|---|
| ENA | SRR1583084 |
| BioProject | PRJNA261698 |
Experiment Details
| Title | Ribosome profiling data of E. coli cells treated with the antibiotic telithromycin |
|---|
Sample Details
| Run Accession | SRR1583084 |
|---|---|
| Total Number Of Spots (Original File)) | 23465502 |
| Total Number Of Bases (Original File) | 1196740602 |
| Average Read Length | 51 |
| Original File Size (Mb) | 796 |
| Experiment Id | SRX708006 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP047380 |
| Pubmed Id | 25349425 |
| Sample | SRS707092 |
| Biosample | SAMN03075509 |
| Sample Type | simple |
| Organism Taxid | 679895 |
| Organism | Escherichia coli |
| Sample Name | GSM1509453 |
| Center Name | GEO |
| Submission | SRA185504 |
| Month | 11 |
| Year | 2014 |
| Author | Kannan |
| Sample Source | Ribosome profiling data of E. coli cells treated with the antibiotic telithromycin |
| Sample Title | Ribosome profiling data of E. coli cells treated with the antibiotic telithromycin |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Strain | BW25113 ΔtolC |
| Growth-Condition | telithromycin (50 μg/ml) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1583084 | Escherichia coli | Ribosome profiling data of E. coli cells treated with the antibiotic telithromycin | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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