SRR1585917 (PRJNA262036)

Processing Status: Failed

General Details

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Sample Name GSM1513406
Organism Saccharomyces cerevisiae
Release Date 4/2016

Sample Links

Run Details

Spots 18129494
Total Bases 634532290
Total Bases 634532290

Repository Details

SRA SRR1585917
ENA SRR1585917
BioProject PRJNA262036

Experiment Details

Title WT YPAD Ribo-Seq rep2, pA-tailed

Sample Details

Run Accession SRR1585917
Total Number Of Spots (Original File)) 18129494
Total Number Of Bases (Original File) 634532290
Average Read Length 35
Original File Size (Mb) 398
Experiment Id SRX710261
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer IIx
Sra Project Accession (Srp) SRP047486
Pubmed Id 27117520
Sample SRS709040
Biosample SAMN03079492
Sample Type simple
Organism Taxid 658763
Organism Saccharomyces cerevisiae
Sample Name GSM1513406
Center Name GEO
Submission SRA185842
Month 4
Year 2016
Author Thompson
Sample Source YWG25
Sample Title WT YPAD Ribo-Seq rep2, pA-tailed
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Wild Type
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain YWG25
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition YPAD (2% glucose w/v)cool on ice, resuspend cells in cold lysis buffer, lyse immediately
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion -
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1585917 Saccharomyces cerevisiae YWG25 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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