SRR16299934 (PRJNA770650)

Processing Status: Failed

General Details

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Sample Name GSM5622938
Organism Mus musculus
Release Date 2/2023

Sample Links

Run Details

Spots 21473752
Total Bases 2147375200
Total Bases 2147375200

Repository Details

SRA SRR16299934
ENA SRR16299934
BioProject PRJNA770650

Experiment Details

Title Ribo-ITP-8cell-4

Sample Details

Run Accession SRR16299934
Total Number Of Spots (Original File)) 21473752
Total Number Of Bases (Original File) 2147375200
Average Read Length 100
Original File Size (Mb) 689
Experiment Id SRX12578692
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP341033
Pubmed Id 37344592
Sample SRS10534530
Biosample SAMN22227776
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM5622938
Center Name GEO
Submission SRA1309682
Month 2
Year 2023
Author Ozadam
Sample Source 8-cell Embryo
Sample Title Ribo-ITP-8cell-4
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor Frozen
Timepoint 1h15min
Tissue Oocyte
Cell-Line 0.0
Cellular-Compartment 0.0
Stage MII-stage Oocyte
Gene 0.0
Sex 0.0
Strain C57BL/6J
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR16299934 Mus musculus 8-cell Embryo 0.0 Ribo-Seq Frozen
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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