SRR16312996 (PRJNA770962)
Processing Status: Completed
General Details
| Sample Name | GSM5624310 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 9/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 49196905 |
|---|---|
| Total Bases | 1419395750 |
| Total Bases | 1419395750 |
Repository Details
| SRA | SRR16312996 |
|---|---|
| ENA | SRR16312996 |
| BioProject | PRJNA770962 |
Experiment Details
| Title | Hela_DMSO_RPF_Rep1 |
|---|
Sample Details
| Run Accession | SRR16312996 |
|---|---|
| Total Number Of Spots (Original File)) | 49196905 |
| Total Number Of Bases (Original File) | 1419395750 |
| Average Read Length | 28 |
| Original File Size (Mb) | 708 |
| Experiment Id | SRX12591531 |
| Library Name | GSM5624310 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP341191 |
| Pubmed Id | 36302897 |
| Sample | SRS10547166 |
| Biosample | SAMN22245326 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM5624310 |
| Center Name | Meyerson Group, Cancer Program, Broad Institute of MIT and Harvard |
| Submission | SRA1489111 |
| Month | 9 |
| Year | 2022 |
| Author | Lee |
| Sample Source | Hela cell line |
| Sample Title | Hela_DMSO_RPF_Rep1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Control |
| Inhibitor | Cycloheximide |
| Timepoint | NANA |
| Tissue | Ovary |
| Cell-Line | HeLa |
| Cellular-Compartment | DMSO |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | female |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR16312996 | Homo sapiens | Hela cell line | HeLa | Ribo-Seq | Cycloheximide |  |
 |
 |
 |
|
|
||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About