SRR16587386 (PRJNA774895)

Processing Status: Completed

General Details

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Sample Name GSM5658201
Organism Homo sapiens
Release Date 2/2023

Sample Links

Run Details

Spots 113685009
Total Bases 4117978149
Total Bases 4117978149

Repository Details

SRA SRR16587386
ENA SRR16587386
BioProject PRJNA774895

Experiment Details

Title MDA-sgCTRL_rpf_r1

Sample Details

Run Accession SRR16587386
Total Number Of Spots (Original File)) 113685009
Total Number Of Bases (Original File) 4117978149
Average Read Length 36
Original File Size (Mb) 1771
Experiment Id SRX12788781
Library Name GSM5658201
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP343302
Pubmed Id <NA>
Sample SRS10734812
Biosample SAMN22590088
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5658201
Center Name Biochemistry and Biophysics, UCSF
Submission SRA1322668
Month 2
Year 2023
Sample Source breast cancer cell line
Sample Title MDA-sgCTRL_rpf_r1
Library-Type Ribo-Seq
Condition Wild Type
Inhibitor Cycloheximide
Tissue Breast
Cell-Line MDA
Cancer poorly metastatic
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR16587386 Homo sapiens breast cancer cell line MDA Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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