SRR1660330 (PRJNA268222)
Processing Status: Completed
General Details
| Sample Name | GSM1552807 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 4/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 43632403 |
|---|---|
| Total Bases | 3272430225 |
| Total Bases | 3272430225 |
Repository Details
| SRA | SRR1660330 |
|---|---|
| ENA | SRR1660330 |
| BioProject | PRJNA268222 |
Experiment Details
| Title | Rec-OE NCCIT Ribosome profiling (RPF) |
|---|
Sample Details
| Run Accession | SRR1660330 |
|---|---|
| Total Number Of Spots (Original File)) | 43632403 |
| Total Number Of Bases (Original File) | 3272430225 |
| Average Read Length | 75 |
| Original File Size (Mb) | 1765 |
| Experiment Id | SRX765941 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP050147 |
| Pubmed Id | 25896322 |
| Sample | SRS750218 |
| Biosample | SAMN03216854 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1552807 |
| Center Name | GEO |
| Submission | SRA204209 |
| Month | 4 |
| Year | 2015 |
| Author | Grow |
| Sample Source | Rec-OE-NCCIT hECC |
| Sample Title | Rec-OE NCCIT Ribosome profiling (RPF) |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Cell-Line | NCCIT cells, hECC |
| Sex | male |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1660330 | Homo sapiens | Rec-OE-NCCIT hECC | NCCIT cells, hECC | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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