SRR16796942 (PRJNA778050)

Processing Status: Completed

General Details

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Sample Name ribo_harr_nts_r1
Organism Cricetulus griseus
Release Date 12/2022

Sample Links

Run Details

Spots 55162304
Total Bases 2813277504
Total Bases 2813277504

Repository Details

SRA SRR16796942
ENA SRR16796942
BioProject PRJNA778050

Experiment Details

Title Harringtonine Ribo-seq non-temerature shifted replicate 1

Sample Details

Run Accession SRR16796942
Total Number Of Spots (Original File)) 55162304
Total Number Of Bases (Original File) 2813277504
Average Read Length 51
Original File Size (Mb) 866
Experiment Id SRX12995939
Library Name ribo_harr_nts_r1
Library Strategy OTHER
Library Selection Inverse rRNA
Library Source OTHER
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP344698
Pubmed Id <NA>
Sample SRS10936128
Biosample SAMN22901736
Sample Type simple
Organism Taxid 10029
Organism Cricetulus griseus
Sample Name ribo_harr_nts_r1
Center Name NIBRT
Submission SRA1323672
Month 12
Year 2022
Sample Title Harringtonine Ribo-seq non-temerature shifted replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition non temperature shifted
Inhibitor Harringtonine
Tissue Ovary
Cell-Line CHO
Stage not applicable
Sex female
Strain not applicable_not applicablenot applicable
Age not applicable
Growth-Condition CHOK1 cell line (CHO K1 mAb) was seeded at a density of 2 × 105 cells/ml in 50ml SFM-II media (Gibco, 12052098) in 8 replicate shake flasks in a Kuhner orbital shaker at 170rpm at 5% CO2.
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR16796942 Cricetulus griseus CHO Ribo-Seq Harringtonine
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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