SRR16796953 (PRJNA778050)
Processing Status: Completed
General Details
| Sample Name | ribo_chx_nts_r3 |
|---|---|
| Organism | Cricetulus griseus |
| Release Date | 12/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 73009656 |
|---|---|
| Total Bases | 2446203415 |
| Total Bases | 2446203415 |
Repository Details
| SRA | SRR16796953 |
|---|---|
| ENA | SRR16796953 |
| BioProject | PRJNA778050 |
Experiment Details
| Title | Cylcoheximide Ribo-seq non-temerature shifted replicate 3 |
|---|
Sample Details
| Run Accession | SRR16796953 |
|---|---|
| Total Number Of Spots (Original File)) | 73009656 |
| Total Number Of Bases (Original File) | 2446203415 |
| Average Read Length | 33 |
| Original File Size (Mb) | 1039 |
| Experiment Id | SRX12995928 |
| Library Name | ribo_chx_nts_r3 |
| Library Strategy | OTHER |
| Library Selection | Inverse rRNA |
| Library Source | OTHER |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP344698 |
| Pubmed Id | <NA> |
| Sample | SRS10936117 |
| Biosample | SAMN22901754 |
| Sample Type | simple |
| Organism Taxid | 10029 |
| Organism | Cricetulus griseus |
| Sample Name | ribo_chx_nts_r3 |
| Center Name | NIBRT |
| Submission | SRA1323672 |
| Month | 12 |
| Year | 2022 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | Cylcoheximide Ribo-seq non-temerature shifted replicate 3 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 3.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | NANA |
| Tissue | Ovary |
| Cell-Line | CHO |
| Cellular-Compartment | 0.0 |
| Stage | not applicable |
| Gene | 0.0 |
| Sex | female |
| Strain | not applicable_not applicablenot applicable |
| Age | not applicable |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | CHOK1 cell line (CHO K1 mAb) was seeded at a density of 2 × 105 cells/ml in 50ml SFM-II media (Gibco, 12052098) in 8 replicate shake flasks in a Kuhner orbital shaker at 170rpm at 5% CO2. |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR16796953 | Cricetulus griseus | 0.0 | CHO | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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