SRR16796958 (PRJNA778050)

Processing Status: Completed

General Details

View quality reports

Sample Name ribo_nodrug_ts_r2
Organism Cricetulus griseus
Release Date 12/2022

Sample Links

Run Details

Spots 61138204
Total Bases 3118048404
Total Bases 3118048404

Repository Details

SRA SRR16796958
ENA SRR16796958
BioProject PRJNA778050

Experiment Details

Title No drug Ribo-seq temerature shifted replicate 2

Sample Details

Run Accession SRR16796958
Total Number Of Spots (Original File)) 61138204
Total Number Of Bases (Original File) 3118048404
Average Read Length 51
Original File Size (Mb) 966
Experiment Id SRX12995923
Library Name ribo_nodrug_ts_r2
Library Strategy OTHER
Library Selection Inverse rRNA
Library Source OTHER
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP344698
Pubmed Id <NA>
Sample SRS10936112
Biosample SAMN22901749
Sample Type simple
Organism Taxid 10029
Organism Cricetulus griseus
Sample Name ribo_nodrug_ts_r2
Center Name NIBRT
Submission SRA1323672
Month 12
Year 2022
Sample Title No drug Ribo-seq temerature shifted replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition temperature shifted
Tissue Ovary
Cell-Line CHO
Stage not applicable
Sex female
Strain not applicable_not applicablenot applicable
Age not applicable
Growth-Condition CHOK1 cell line (CHO K1 mAb) was seeded at a density of 2 × 105 cells/ml in 50ml SFM-II media (Gibco, 12052098) in 8 replicate shake flasks in a Kuhner orbital shaker at 170rpm at 5% CO2.
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR16796958 Cricetulus griseus CHO Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About