SRR16913166 (PRJNA779461)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM5685772 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 6/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 74629852 |
|---|---|
| Total Bases | 7462985200 |
| Total Bases | 7462985200 |
Repository Details
| SRA | SRR16913166 |
|---|---|
| ENA | SRR16913166 |
| BioProject | PRJNA779461 |
Experiment Details
| Title | set57.TDRD3-KO.Ribo-seq.rep1 |
|---|
Sample Details
| Run Accession | SRR16913166 |
|---|---|
| Total Number Of Spots (Original File)) | 74629852 |
| Total Number Of Bases (Original File) | 7462985200 |
| Average Read Length | 50 |
| Original File Size (Mb) | 2348 |
| Experiment Id | SRX13105594 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | PAIRED |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina NovaSeq 6000 |
| Sra Project Accession (Srp) | SRP345494 |
| Pubmed Id | 35748872 |
| Sample | SRS11041840 |
| Biosample | SAMN23039097 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM5685772 |
| Center Name | GEO |
| Submission | SRA1327447 |
| Month | 6 |
| Year | 2022 |
| Author | Su |
| Sample Source | human colorectal carcinoma cell line |
| Sample Title | set57.TDRD3-KO.Ribo-seq.rep1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Inhibitor | Cycloheximide |
| Tissue | Colon |
| Cell-Line | HCT116 |
| Genotype | TDRD3-KO |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR16913166 | Homo sapiens | human colorectal carcinoma cell line | HCT116 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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