SRR16955387 (PRJNA780800)

Processing Status: Failed

General Details

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Sample Name GSM5692038
Organism Lacticaseibacillus rhamnosus
Release Date 12/2021

Sample Links

Run Details

Spots 61136412
Total Bases 9170461800
Total Bases 9170461800

Repository Details

SRA SRR16955387
ENA SRR16955387
BioProject PRJNA780800

Experiment Details

Title Lactobacillus rhamnosus ATCC 53103-Ribo-seq data-OS1

Sample Details

Run Accession SRR16955387
Total Number Of Spots (Original File)) 61136412
Total Number Of Bases (Original File) 9170461800
Average Read Length 0
Original File Size (Mb) 4044
Experiment Id SRX13146985
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model HiSeq X Ten
Sra Project Accession (Srp) SRP346338
Pubmed Id 34899662
Sample SRS11079372
Biosample SAMN23176778
Sample Type simple
Organism Taxid 568703
Organism Lacticaseibacillus rhamnosus
Sample Name GSM5692038
Center Name GEO
Submission SRA1329873
Month 12
Year 2021
Author Fan
Sample Source yogurt
Sample Title Lactobacillus rhamnosus ATCC 53103-Ribo-seq data-OS1
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line NA_whole cells
Cellular-Compartment RPFs
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR16955387 Lacticaseibacillus rhamnosus yogurt NA_whole cells Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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