SRR16955387 (PRJNA780800)
Processing Status: Failed
General Details
Sample Name | GSM5692038 |
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Organism | Lacticaseibacillus rhamnosus |
Release Date | 12/2021 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 61136412 |
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Total Bases | 9170461800 |
Total Bases | 9170461800 |
Repository Details
SRA | SRR16955387 |
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ENA | SRR16955387 |
BioProject | PRJNA780800 |
Experiment Details
Title | Lactobacillus rhamnosus ATCC 53103-Ribo-seq data-OS1 |
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Sample Details
Run Accession | SRR16955387 |
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Total Number Of Spots (Original File)) | 61136412 |
Total Number Of Bases (Original File) | 9170461800 |
Average Read Length | 0 |
Original File Size (Mb) | 4044 |
Experiment Id | SRX13146985 |
Library Name | 0.0 |
Library Strategy | OTHER |
Library Selection | other |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | HiSeq X Ten |
Sra Project Accession (Srp) | SRP346338 |
Pubmed Id | 34899662 |
Sample | SRS11079372 |
Biosample | SAMN23176778 |
Sample Type | simple |
Organism Taxid | 568703 |
Organism | Lacticaseibacillus rhamnosus |
Sample Name | GSM5692038 |
Center Name | GEO |
Submission | SRA1329873 |
Month | 12 |
Year | 2021 |
Author | Fan |
Sample Source | yogurt |
Sample Title | Lactobacillus rhamnosus ATCC 53103-Ribo-seq data-OS1 |
Library-Type | Ribo-Seq |
Replicate-Number | 0.0 |
Condition | Test |
Inhibitor | 0.0 |
Timepoint | NANA |
Tissue | 0.0 |
Cell-Line | NA_whole cells |
Cellular-Compartment | RPFs |
Stage | 0.0 |
Gene | 0.0 |
Sex | 0.0 |
Strain | 0.0 |
Age | 0.0 |
Infected | 0.0 |
Disease | 0.0 |
Genotype | 0.0 |
Feeding | 0.0 |
Temperature | 0.0 |
Sirna | 0.0 |
Sgrna | 0.0 |
Shrna | 0.0 |
Plasmid | 0.0 |
Growth-Condition | 0.0 |
Stress | 0.0 |
Cancer | 0.0 |
Microrna | 0.0 |
Individual | 0.0 |
Antibody Used | 0.0 |
Ethnicity | 0.0 |
Dose | 0.0 |
Stimulation | 0.0 |
Host Organism | 0.0 |
Unique Molecular Identifier (Umi) | 0.0 |
Adapter Sequence | 0.0 |
Mode Of Separation | 0.0 |
Mode Of Rrna Depletion | 0.0 |
Barcode Information | 0.0 |
Nucelase Used | 0.0 |
Kit Used | 0.0 |
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SRR16955387 | Lacticaseibacillus rhamnosus | yogurt | NA_whole cells | Ribo-Seq | 0.0 | ||||||||
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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