SRR17971137 (PRJNA805181)

General Details

View quality reports

Sample Name GSM5885026
Organism Mus musculus
Release Date 9/2022

Sample Links

Run Details

Spots 77803851
Total Bases 5913092676
Total Bases 5913092676

Repository Details

SRA SRR17971137
ENA SRR17971137
BioProject PRJNA805181

Experiment Details

Title rS5: MEF_Fbxo4(-/-)+non_targeting siRNA rep 1 [RPF]

Sample Details

Run Accession SRR17971137
Total Number Of Spots (Original File)) 77803851
Total Number Of Bases (Original File) 5913092676
Average Read Length 76
Original File Size (Mb) 2018
Experiment Id SRX14127411
Library Name GSM5885026
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 550
Sra Project Accession (Srp) SRP359195
Pubmed Id 36329064
Sample SRS11954506
Biosample SAMN25829767
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM5885026
Center Name Deihl Lab, Department of Biochemistry, Case Western Reserve University
Submission SRA1369897
Month 9
Year 2022
Author Mucha
Sample Source C57BL/6
Sample Title rS5: MEF_Fbxo4(-/-)+non_targeting siRNA rep 1 [RPF]
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition High
Cell-Line Murine Embrionic Fibroblasts
Strain C57BL/6
Genotype Fbxo4 knock-out
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR17971137 Mus musculus C57BL/6 Murine Embrionic Fibroblasts Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About