SRR1802139 (PRJNA275305)
Processing Status: Completed
General Details
| Sample Name | GSM1608278 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 11/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 24902531 |
|---|---|
| Total Bases | 1270029081 |
| Total Bases | 1270029081 |
Repository Details
| SRA | SRR1802139 |
|---|---|
| ENA | SRR1802139 |
| BioProject | PRJNA275305 |
Experiment Details
| Title | ERSrcEtOH24hr_chx_rep2 |
|---|
Sample Details
| Run Accession | SRR1802139 |
|---|---|
| Total Number Of Spots (Original File)) | 24902531 |
| Total Number Of Bases (Original File) | 1270029081 |
| Average Read Length | 51 |
| Original File Size (Mb) | 789 |
| Experiment Id | SRX876056 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP054971 |
| Pubmed Id | 26900662 |
| Sample | SRS844816 |
| Biosample | SAMN03342126 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1608278 |
| Center Name | GEO |
| Submission | SRA240809 |
| Month | 11 |
| Year | 2015 |
| Author | Ji |
| Sample Source | Breast epithelial cell |
| Sample Title | ERSrcEtOH24hr_chx_rep2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Tissue | Breast |
| Cell-Line | MCF10A |
| Cellular-Compartment | Endoplasmic reticulum |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1802139 | Homo sapiens | Breast epithelial cell | MCF10A | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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