SRR1827839 (PRJNA209566)

Processing Status: Failed

General Details

View quality reports

Sample Name S2.Riboseq.6
Organism Homo sapiens
Release Date 5/2015

Sample Links

Run Details

Spots 24962227
Total Bases 1248111350
Total Bases 1248111350

Repository Details

SRA SRR1827839
ENA SRR1827839
BioProject PRJNA209566

Experiment Details

Title RNA fragments from ribosomal profiling sample from Skin/Dermal fibroblast of a human participant in the dbGaP study ''Location and Function of Cytosine-5 Methylation in RNA''

Sample Details

Run Accession SRR1827839
Total Number Of Spots (Original File)) 24962227
Total Number Of Bases (Original File) 1248111350
Average Read Length 50
Original File Size (Mb) 786
Experiment Id SRX898062
Library Name S2.Riboseq.6
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP033881
Pubmed Id <NA>
Sample SRS863221
Biosample SAMN03320085
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name S2.Riboseq.6
Center Name NICHD-phs000645
Submission SRA245568
Month 5
Year 2015
Sample Title RNA fragments from ribosomal profiling sample from Skin/Dermal fibroblast of a human participant in the dbGaP study ''Location and Function of Cytosine-5 Methylation in RNA''
Library-Type Ribo-Seq
Condition Wild Type
Inhibitor Cycloheximide
Cellular-Compartment Cytoplasmic
Disease Dubowitz Syndrome
Individual 2
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1827839 Homo sapiens Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About