SRR1827871 (PRJNA209566)

Processing Status: Failed

General Details

View quality reports

Sample Name S3.Riboseq.12
Organism Homo sapiens
Release Date 5/2015

Sample Links

Run Details

Spots 22871493
Total Bases 1143574650
Total Bases 1143574650

Repository Details

SRA SRR1827871
ENA SRR1827871
BioProject PRJNA209566

Experiment Details

Title RNA fragments from ribosomal profiling sample from Skin/Dermal fibroblast of a human participant in the dbGaP study ''Location and Function of Cytosine-5 Methylation in RNA''

Sample Details

Run Accession SRR1827871
Total Number Of Spots (Original File)) 22871493
Total Number Of Bases (Original File) 1143574650
Average Read Length 50
Original File Size (Mb) 698
Experiment Id SRX898094
Library Name S3.Riboseq.12
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP033881
Pubmed Id <NA>
Sample SRS863189
Biosample SAMN03320043
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name S3.Riboseq.12
Center Name NICHD-phs000645
Submission SRA245568
Month 5
Year 2015
Sample Title RNA fragments from ribosomal profiling sample from Skin/Dermal fibroblast of a human participant in the dbGaP study ''Location and Function of Cytosine-5 Methylation in RNA''
Library-Type Ribo-Seq
Condition Wild Type
Inhibitor Cycloheximide
Tissue Skin
Cellular-Compartment Cytoplasmic
Disease Dubowitz Syndrome
Individual 3
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1827871 Homo sapiens Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About