SRR1827880 (PRJNA209566)

Processing Status: Failed

General Details

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Sample Name S4.Riboseq.16
Organism Homo sapiens
Release Date 5/2015

Sample Links

Run Details

Spots 23998071
Total Bases 1199903550
Total Bases 1199903550

Repository Details

SRA SRR1827880
ENA SRR1827880
BioProject PRJNA209566

Experiment Details

Title RNA fragments from ribosomal profiling sample from Skin/Dermal fibroblast of a human female participant in the dbGaP study ''Location and Function of Cytosine-5 Methylation in RNA''

Sample Details

Run Accession SRR1827880
Total Number Of Spots (Original File)) 23998071
Total Number Of Bases (Original File) 1199903550
Average Read Length 50
Original File Size (Mb) 757
Experiment Id SRX898103
Library Name S4.Riboseq.16
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP033881
Pubmed Id <NA>
Sample SRS863181
Biosample SAMN03320042
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name S4.Riboseq.16
Center Name NICHD-phs000645
Submission SRA245568
Month 5
Year 2015
Sample Title RNA fragments from ribosomal profiling sample from Skin/Dermal fibroblast of a human female participant in the dbGaP study ''Location and Function of Cytosine-5 Methylation in RNA''
Library-Type Ribo-Seq
Condition Wild Type
Inhibitor Cycloheximide
Tissue Skin
Cellular-Compartment Cytoplasmic
Sex female
Individual 4
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1827880 Homo sapiens Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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